Install gnome-boxes and bottles as overlay packages instead of flatpaks to increase compatibility

recipes/recipe.yml

@@ -62,6 +62,8 @@ modules:
       - cockpit-selinux
       - cockpit-sosreport
       - cockpit-storaged
+      - gnome-boxes
+      - bottles
   - type: fonts
     fonts:
       nerd-fonts:
@@ -105,6 +107,15 @@ modules:
         - org.mozilla.Thunderbird
         - io.gitlab.librewolf-community
         - io.github.ungoogled_software.ungoogled_chromium
+      remove:
+        - com.usebottles.bottles
+        - org.gnome.Boxes
+        - org.videolan.VLC
+    user:
+      remove:
+        - com.usebottles.bottles
+        - org.gnome.Boxes
+        - org.videolan.VLC
   - type: systemd
     system:
       enabled: